In a hard-hitting two-page letter on Tuesday, addressed to AIFF president Kalyan Chaubey, the two international bodies expressed "profound concern" at the federation's failure.
Kalyan Chaubey has now also expressed India's interest in bidding for the 2031 edition of the AFC Asian Cup.
The AIFF boss also announced the start of Under-17 Women's League which will be held in association with the Sports Authority of India.